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1

Biosynthesis and Function of Posttranscriptional Modifications of Transfer RNAs

El Yacoubi, Basma, Bailly, Marc, de Crécy-Lagard, Valérie

Journal:

Annual Review of Genetics

Year:

2012

Language:

english

File:

PDF, 1.13 MB

english, 2012

2

Identifying Pathogenic Islands through Genome Comparison

Bacusmo, Jo Marie, Bokor, Julie, Savage, Kathy, de Crécy-Lagard, Valérie

Journal:

The American Biology Teacher

Year:

2019

Language:

english

File:

PDF, 636 KB

english, 2019

3

INCORPORATION OF NONNATURAL AMINO ACIDS INTO PROTEINS

Hendrickson, Tamara L., Crécy-Lagard, Valérie de, Schimmel, Paul

Journal:

Annual Review of Biochemistry

Year:

2004

Language:

english

File:

PDF, 321 KB

english, 2004

4

Plant B Vitamin Pathways and their Compartmentation: a Guide for the Perplexed

Gerdes, S., Lerma-Ortiz, C., Frelin, O., Seaver, S. M. D., Henry, C. S., de Crecy-Lagard, V., Hanson, A. D.

Journal:

Journal of Experimental Botany

Year:

2012

Language:

english

File:

PDF, 9.09 MB

english, 2012

5

Erratum to “Towards a Systems Approach in the Genetic Analysis of Archaea: Accelerating Mutant Construction and Phenotypic Analysis in Haloferax volcanii ”

Blaby, Ian K., Phillips, Gabriela, Blaby-Haas, Crysten E., Gulig, Kevin S., El Yacoubi, Basma, de Crécy-Lagard, Valérie

Journal:

Year:

2011

Language:

english

File:

PDF, 1.02 MB

english, 2011

6

A Gateway platform for functional genomics in Haloferax volcanii : deletion of three tRNA modification genes

Yacoubi, Basma El, Phillips, Gabriela, Blaby, Ian K., Haas, Crysten E., Cruz, Yulien, Greenberg, Jamie, de Crécy-Lagard, Valérie

Journal:

Year:

2009

Language:

english

File:

PDF, 6.58 MB

english, 2009

7

Bacterial RNA Degradosomes: Molecular Machines under Tight Control

Tejada-Arranz, Alejandro, de Crécy-Lagard, Valérie, de Reuse, Hilde

Journal:

Trends in Biochemical Sciences

Year:

2019

Language:

english

File:

PDF, 2.70 MB

english, 2019

8

The ClpB ATPase of Streptomyces albus G belongs to the HspR heat shock regulon

Cosette Grandvalet, Valérie De Crécy-Lagard, Philippe Mazodier

Journal:

Molecular Microbiology

Year:

1999

Language:

english

File:

PDF, 1.10 MB

english, 1999

9

Alteration of the synthesis of the Clp ATP-dependent protease affects morphological and physiological differentiation in Streptomyces

Valérie De Crécy-Lagard, Pascale Servant-Moisson, Julie Viala, Cosette Grandvalet, Philippe Mazodier

Journal:

Molecular Microbiology

Year:

1999

Language:

english

File:

PDF, 1.05 MB

english, 1999

10

Long term adaptation of a microbial population to a permanent metabolic constraint: overcoming thymineless death by experimental evolution ofEscherichia coli

Valérie A de Crécy-Lagard, Jacques Bellalou, Rupert Mutzel, Philippe Marlière

Journal:

BMC Biotechnology

Year:

2001

Language:

english

File:

PDF, 459 KB

english, 2001

11

Predicting the pathway involved in post-translational modification of Elongation factor P in a subset of bacterial species

Marc Bailly, Valérie de Crécy-Lagard

Journal:

Year:

2010

Language:

english

File:

PDF, 1.90 MB

english, 2010

12

Development of a novel continuous culture device for experimental evolution of bacterial populations

E. de Crécy, D. Metzgar, C. Allen, M. Pénicaud, B. Lyons, C. J. Hansen, V. de Crécy-Lagard

Journal:

Applied Microbiology and Biotechnology

Year:

2007

Language:

english

File:

PDF, 288 KB

english, 2007

13

A 5-formyltetrahydrofolate cycloligase paralog from all domains of life: comparative genomic and experimental evidence for a cryptic role in thiamin metabolism

Anne Pribat, Ian K. Blaby, Aurora Lara-Núñez, Linda Jeanguenin, Romain Fouquet, Océane Frelin, Jesse F. Gregory, Benjamin Philmus, Tadhg P. Begley, Valérie de Crécy-Lagard, Andrew D. Hanson

Journal:

Functional & Integrative Genomics

Year:

2011

Language:

english

File:

PDF, 902 KB

english, 2011

14

Role of a Zn-independent DksA in Zn homeostasis and stringent response

Crysten E. Blaby-Haas, Ran Furman, Dmitry A. Rodionov, Irina Artsimovitch, Valérie de Crécy-Lagard

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 604 KB

english, 2011

15

10.1038/35075135

Fàbrega, Carme, Farrow, Mark A., Mukhopadhyay, Biswarup, de Crécy-Lagard, Valérie, Ortiz, Angel R., Schimmel, Paul

Journal:

Year:

2001

Language:

english

File:

PDF, 82 KB

english, 2001

16

10.1038/35075130

Fàbrega, Carme, Farrow, Mark A., Mukhopadhyay, Biswarup, de Crécy-Lagard, Valérie, Ortiz, Angel R., Schimmel, Paul

Journal:

Year:

2001

Language:

english

File:

PDF, 56 KB

english, 2001

17

10.1038/35075121

Fàbrega, Carme, Farrow, Mark A., Mukhopadhyay, Biswarup, de Crécy-Lagard, Valérie, Ortiz, Angel R., Schimmel, Paul

Journal:

Year:

2001

Language:

english

File:

PDF, 289 KB

english, 2001

18

10.1038/35075132

Fàbrega, Carme, Farrow, Mark A., Mukhopadhyay, Biswarup, de Crécy-Lagard, Valérie, Ortiz, Angel R., Schimmel, Paul

Journal:

Year:

2001

Language:

english

File:

PDF, 207 KB

english, 2001

19

10.1038/35075127

Fàbrega, Carme, Farrow, Mark A., Mukhopadhyay, Biswarup, de Crécy-Lagard, Valérie, Ortiz, Angel R., Schimmel, Paul

Journal:

Year:

2001

Language:

english

File:

PDF, 190 KB

english, 2001

20

A role for the universal Kae1/Qri7/YgjD (COG0533) family in tRNA modification

El Yacoubi, Basma, Hatin, Isabelle, Deutsch, Christopher, Kahveci, Tamer, Rousset, Jean-Pierre, Iwata-Reuyl, Dirk, G Murzin, Alexey, de Crécy-Lagard, Valérie

Journal:

The EMBO Journal

Year:

2011

Language:

english

File:

PDF, 1.25 MB

english, 2011

21

YeiR: a metal-binding GTPase from Escherichia coli involved in metal homeostasis

Blaby-Haas, Crysten E., Flood, Jessica A., Crécy-Lagard, Valérie de, Zamble, Deborah B.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.91 MB

english, 2012

22

Comparative RNomics and Modomics in Mollicutes: Prediction of Gene Function and Evolutionary Implications

Valérie de Crécy-Lagard, Christian Marck, Céline Brochier-Armanet, Henri Grosjean

Journal:

Year:

2007

Language:

english

File:

PDF, 2.44 MB

english, 2007

23

Deciphering synonymous codons in the three domains of life: Co-evolution with specific tRNA modification enzymes

Henri Grosjean, Valérie de Crécy-Lagard, Christian Marck

Journal:

Year:

2010

Language:

english

File:

PDF, 1.59 MB

english, 2010

24

Plasmodium falciparum: a paradigm for alternative folate biosynthesis in diverse microorganisms?

John E. Hyde, Sabine Dittrich, Ping Wang, Paul F.G. Sims, Valérie de Crécy-Lagard, Andrew D. Hanson

Journal:

Trends in Parasitology

Year:

2008

Language:

english

File:

PDF, 976 KB

english, 2008

25

Aminoacylation of the anticodon stem by a tRNA-synthetase paralog: relic of an ancient code?

Henri Grosjean, Valérie de Crécy-Lagard, Glenn R. Björk

Journal:

Trends in Biochemical Sciences

Year:

2004

Language:

english

File:

PDF, 102 KB

english, 2004

26

Mining high-throughput experimental data to link gene and function

Crysten E. Blaby-Haas, Valérie de Crécy-Lagard

Journal:

Trends in Biotechnology

Year:

2011

Language:

english

File:

PDF, 483 KB

english, 2011

27

A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life

Crysten E Haas, Dmitry A Rodionov, Janette Kropat, Davin Malasarn, Sabeeha S Merchant, Valérie de Crécy-Lagard

Journal:

Year:

2009

Language:

english

File:

PDF, 2.07 MB

english, 2009

28

SOLiD sequencing of fourVibrio vulnificusgenomes enables comparative genomic analysis and identification of candidate clade-specific virulence genes

Paul A Gulig, Valérie de Crécy-Lagard, Anita C Wright, Brandon Walts, Marina Telonis-Scott, Lauren M McIntyre

Journal:

Year:

2010

Language:

english

File:

PDF, 1.27 MB

english, 2010

29

Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations

Valérie de Crécy-Lagard, Basma El Yacoubi, Rocío Díaz de la Garza, Alexandre Noiriel, Andrew D Hanson

Journal:

Year:

2007

Language:

english

File:

PDF, 664 KB

english, 2007

30

RNomics and Modomics in the halophilic archaeaHaloferax volcanii: identification of RNA modification genes

Henri Grosjean, Christine Gaspin, Christian Marck, Wayne A Decatur, Valérie de Crécy-Lagard

Journal:

Year:

2008

Language:

english

File:

PDF, 936 KB

english, 2008

31

Diversity of Archaeosine Synthesis in Crenarchaeota

Phillips, Gabriela, Swairjo, Manal A., Gaston, Kirk W., Bailly, Marc, Limbach, Patrick A., Iwata-Reuyl, Dirk, de Crécy-Lagard, Valérie

Journal:

ACS Chemical Biology

Year:

2012

Language:

english

File:

PDF, 2.68 MB

english, 2012

32

Biosynthesis of Threonylcarbamoyl Adenosine (t6A), a Universal tRNA Nucleoside

Deutsch, C., El Yacoubi, B., de Crecy-Lagard, V., Iwata-Reuyl, D.

Journal:

Journal of Biological Chemistry

Year:

2012

Language:

english

File:

PDF, 1010 KB

english, 2012

33

Molecular determinants of dihydrouridine synthase activity

Dan F. Savage, Valérie de Crécy-Lagard, Anthony C. Bishop

Journal:

Year:

2006

Language:

english

File:

PDF, 845 KB

english, 2006

34

Biosynthesis and function of tRNA modifications in Archaea

Gabriela Phillips, Valérie de Crécy-Lagard

Journal:

Current Opinion in Microbiology

Year:

2011

Language:

english

File:

PDF, 344 KB

english, 2011

35

Finding novel metabolic genes through plant-prokaryote phylogenomics

Valérie de Crécy-Lagard, Andrew D. Hanson

Journal:

Trends in Microbiology

Year:

2007

Language:

english

File:

PDF, 862 KB

english, 2007

36

Mutational Separation of Two Pathways for Editing by a Class I tRNA Synthetase

Tamara L Hendrickson, Tyzoon K Nomanbhoy, Valérie de Crécy-Lagard, Shuya Fukai, Osamu Nureki, Shigeyuki Yokoyama, Paul Schimmel

Journal:

Year:

2002

Language:

english

File:

PDF, 325 KB

english, 2002

37

Comparative Genomics Guided Discovery of Two Missing Archaeal Enzyme Families Involved in the Biosynthesis of the Pterin Moiety of Tetrahydromethanopterin and Tetrahydrofolate

Crécy-Lagard, Valérie de, Phillips, Gabriela, Grochowski, Laura L., Yacoubi, Basma El, Jenney, Francis, Adams, Michael W. W., Murzin, Alexey G., White, Robert H.

Journal:

ACS Chemical Biology

Year:

2012

Language:

english

File:

PDF, 553 KB

english, 2012

38

Enlarging the Amino Acid Set of Escherichia coli by Infiltration of the Valine Coding Pathway

Doring, V., Mootz, H. D., Nangle, L. A., Hendrickson, T. L., de Crecy-Lagard, V., Schimmel, P., Marliere, P.

Journal:

Year:

2001

Language:

english

File:

PDF, 550 KB

english, 2001

39

Comparative genomic analysis of the DUF71/COG2102 family predicts roles in diphthamide biosynthesis and B12 salvage

Valérie de Crécy-Lagard, Farhad Forouhar, Céline Brochier-Armanet, Liang Tong, John F Hunt

Journal:

Year:

2012

Language:

english

File:

PDF, 826 KB

english, 2012

40

Identification of the thiamin salvage enzyme thiazole kinase in Arabidopsis and maize

Yazdani, Mohammad, Zallot, Rémi, Tunc-Ozdemir, Meral, de Crécy-Lagard, Valérie, Shintani, David K., Hanson, Andrew D.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.13 MB

english, 2013

41

Brenner's Encyclopedia of Genetics || Comparative Genomics

de Crécy-Lagard, V.

Year:

2013

Language:

english

File:

PDF, 1.24 MB

english, 2013

42

Mannitol-1-phosphate dehydrogenases/phosphatases: a family of novel bifunctional enzymes for bacterial adaptation to osmotic stress

Sand, Miriam, Rodrigues, Marta, González, José M., de Crécy-Lagard, Valérie, Santos, Helena, Müller, Volker, Averhoff, Beate

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 1.22 MB

english, 2015

43

Variations in metabolic pathways create challenges for automated metabolic reconstructions: Examples from the tetrahydrofolate synthesis pathway

de Crécy-Lagard, Valérie

Journal:

Computational and Structural Biotechnology Journal

Year:

2014

Language:

english

File:

PDF, 2.27 MB

english, 2014

44

Acinetobacter:Molecular Biology

de Crécy-Lagard, Valérie

Journal:

Quarterly Review of Biology

Year:

2008

Language:

english

File:

PDF, 89 KB

english, 2008

45

Plant, Animal, and Fungal Micronutrient Queuosine Is Salvaged by Members of the DUF2419 Protein Family

Zallot, Rémi, Brochier-Armanet, Céline, Gaston, Kirk W., Forouhar, Farhad, Limbach, Patrick A., Hunt, John F., de Crécy-Lagard, Valérie

Journal:

ACS Chemical Biology

Year:

2014

Language:

english

File:

PDF, 4.00 MB

english, 2014

46

Functional Promiscuity of the COG0720 Family

Phillips, Gabriela, Grochowski, Laura L., Bonnett, Shilah, Xu, Huimin, Bailly, Marc, Blaby-Haas, Crysten, El Yacoubi, Basma, Iwata-Reuyl, Dirk, White, Robert H., de Crécy-Lagard, Valérie

Journal:

ACS Chemical Biology

Year:

2012

Language:

english

File:

PDF, 4.68 MB

english, 2012

47

Phylogenomic and Functional Analysis of Pterin-4a-Carbinolamine Dehydratase Family (COG2154) Proteins in Plants and Microorganisms

Naponelli, V., Noiriel, A., Ziemak, M. J., Beverley, S. M., Lye, L.-F., Plume, A. M., Botella, J. R., Loizeau, K., Ravanel, S., Rebeille, F., de Crecy-Lagard, V., Hanson, A. D.

Journal:

PLANT PHYSIOLOGY

Year:

2008

Language:

english

File:

PDF, 1.86 MB

english, 2008

48

A FAST AND ACCURATE ALGORITHM FOR COMPARATIVE ANALYSIS OF METABOLIC PATHWAYS

AY, FERHAT, KAHVECI, TAMER, DE CRÉCY-LAGARD, VALÉRIE

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2009

Language:

english

File:

PDF, 1.76 MB

english, 2009

49

Comprehensive Natural Products Chemistry || Catalysis of Amide and Ester Bond Formation by Peptide Synthetase Multienzymatic Complexes

de Crécy-Lagard, Valérie

Year:

1999

Language:

english

File:

PDF, 716 KB

english, 1999

50

Identification and Characterization of the Missing Pyrimidine Reductase in the Plant Riboflavin Biosynthesis Pathway

Hasnain, G., Frelin, O., Roje, S., Ellens, K. W., Ali, K., Guan, J.-C., Garrett, T. J., de Crecy-Lagard, V., Gregory, J. F., McCarty, D. R., Hanson, A. D.

Journal:

PLANT PHYSIOLOGY

Year:

2013

Language:

english

File:

PDF, 1.12 MB

english, 2013